데이터베이스

  • Genome
  • Preteome
  • Transcriptome
  • Structural Biology
  • Systems Biology
  • Other

Genome

  • miRseqViewer 논문 웹사이트

    Multi-panel visualization of sequence, structure and expression for analysis of microRNA sequencing data.

    Insu Jang, Hyeshik Chang, Yukyung Jun, Seongjin Park, Jin Ok Yang, Byungwook Lee, Wankyu Kim, Narry Kim, Sanghyuk Lee. Bioinformatics (2014) doi: 10.1093/bioinformatics/btu676.
  • VnD 논문 웹사이트

    a structure-centric database of disease-related SNPs and drugs.

    Jin Ok Yang, Sangho Oh, Gunhwan Ko, Seong-Jin Park, Woo-Yeon Kim, Byungwook Lee, Sanghyuk Lee. Nucleic Acids Research. 2011 Jan;39(Database issue):D939-44.
  • ssSNPTarget 논문 웹사이트

    genome-wide splice-site Single Nucleotide Polymorphism database.

    Yang JO, Kim WY, & Bhak J. Hum Mutat 30(12):E1010-1020.
  • PDbase 논문

    a database of Parkinson""s disease-related genes and genetic variation using substantia nigra ESTs.

    Yang JO, Kim WY, Jeong SY, Oh JH, Jho S, Bhak J, & Kim NS. BMC Genomics 10 Suppl 3:S32.
  • CONSORF 논문 웹사이트

    a consensus prediction system for prokaryotic coding sequences.

    Kang S, Yang SJ, Kim S, & Bhak J. Bioinformatics 23(22):3088-3090.
  • GAzer 논문

    gene set analyzer.

    Kim SB, Yang S, Kim SK, Kim SC, Woo HG, Volsky DJ, Kim SY, & Chu IS. Bioinformatics 23(13):1697-1699.
  • SNP@WEB 웹사이트

    Single Nucleotide polymorphisms (SNPs) can affect gene functions and expressions from DNA to protein levels. To help SNP researchers, we developed SNP@WEB, a web-based catalog of databases and tools for SNP studies.

  • GeVab 논문 웹사이트

    a prototype genome variation analysis browsing server.

    Kim WY, Kim SY, Kim TH, Ahn SM, Byun HN, Kim D, Kim DS, Lee YS, Ghang H, Park D, Kim BC, Kim C, Lee S, Kim SJ, & Bhak J. BMC Bioinformatics 10 Suppl 15:S3.
  • KCGD 웹사이트

    KCGP has analyzed cancer genomic data with clinical information and provides useful information related with prognosis of Korean cancer patients. If you have any keywords (genes or diseases) of interest, feel free to use KCGP quick searching system.

  • CLUSTOM 논문 웹사이트

    a novel method for clustering 16S rRNA next generation sequences by overlap minimization

    Hwang K, Oh J, Kim TK, Kim BK, Yu DS, Hou BK, Caetano-Anollés G, Hong SG, Kim KM. PLoS One. 2013 May 1;8(5):e62623
  • Gerontome 논문

    a web-based database server for aging-related genes and analysis pipelines

    Kwon J, Lee B, Chung H. BMC Genomics. 2010 Dec 2;11 Suppl 4:S20
  • ChimerDB 논문

    a knowledgebase for fusion genes updated

    Kim P, Yoon S, Kim N, Lee S, Ko M, Lee H, Kang H, Kim J, Lee S Nucleic Acids Res. 2010 Jan;38(Database issue):D81-5
  • EVOG 논문 웹사이트

    a database for evolutionary analysis of overlapping genes

    Kim DS, Cho CY, Huh JW, Kim HS, Cho HG. Nucleic Acids Res. 2009 Jan;37(Database issue):D698-702
  • Diseasome 논문

    An integrated database-pipeline system for studying single nucleotide polymorphisms and diseases

    Yang JO, Hwang S, Oh J, Bhak J, Sohn TK. BMC Bioinformatics. 2008 Dec 12;9 Suppl 12:S19
  • SNP@Promoter 논문

    a database of human SNPs (single nucleotide polymorphisms) within the putative promoter regions.

    Kim BC, Kim WY, Park D, Chung WH, Shin KS, Bhak J. BMC Bioinformatics. 2008;9 Suppl 1:S2